TY - JOUR
T1 - Similarity Analysis of Protein Sequences Based on the EMD Method
JO - Journal of Fiber Bioengineering and Informatics
VL - 3
SP - 387
EP - 395
PY - 2014
DA - 2014/07
SN - 7
DO - http://doi.org/10.3993/jfbi09201408
UR - https://global-sci.org/intro/article_detail/jfbi/4794.html
KW - MQ-RBF Quasi-interpolant
KW - EMD
KW - IMFs
KW - Similarity Analysis
KW - DNA Sequences
AB - An Empirical Mode Decomposition (EMD) method to analyze the similarities of protein sequences is
proposed. The EMD method was used to divide a signal sequence converted from a protein sequence
into a group of well-behaved Intrinsic Mode Functions (IMFs) and a residue which is monotonic or a
trend. This is so that the similarities can be compared among protein sequences by the corresponding
residues conveniently and intuitively. This work verifies the method's suitability by using the cytochrome
c protein sequences of seven different species.